Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860650.1_cds_XP_016514695.1_27117
CDS Infomation

[gene=LOC107831446] [db_xref=GeneID:107831446] [protein=valine--tRNA ligase, mitochondrial 1-like isoform X2] [protein_id=XP_016514695.1] [location=join(11141..11257,11759..11864,11950..12014,12546..12605,12869..13038,13171..13243,14349..14414,14490..14573,15650..15727,15979..16062,16165..16244,16404..16461,16547..16849,16949..17119,17978..18177,18573..18942,19444..19695,19781..20281,20743..20849,21590..21689,22140..22288,22839..22887)] [gbkey=CDS]
Sequence

ATGCTCCTTTACACGCGACAGCCAGCATATTTACAAACGGAGTTGCAGAGTTGGTTTCCT
CCTTCTGCAACAGCCAGCATAGTTACAATTTACGAACAGAGTAATTTCGCCTCCCAGGTC
TTGTCAAGGCCTCCTAGACTGAGTCAACCTCCTCCATCAGCCGCGGATTCTTCGTCCTCT
TATGCGCCATTGTATTTTCACTTCTACAGCCGATACGATGATGCAACATCAGATGGAAAG
GAATTAACTCTTGAAGATTTTGAAAAGAAAAAGAAAAAGGAAGAAAAGGCTAGAGAGAAA
GAACTGAAAAAACTCAAGGCTGCACTAAAAGTGGAAGCAGCAAAACAGGCACAAGCTGCT
TCCAATGTGTCAAAGAAGGATAAGAAGAAGAACTCAAAAATGGAGGGTGAAGAGGAAAAT
TATGAAGATTTTGTTGATCCAGGGACACCCCTGGGAGAGAAGAAGCAGCTCTCCCGTCAA
ATGGCAAAAACTTATAGTCCCAGTGCTGTAGAGAAATCGTGGTATGCATGGTGGGAAAAG
TCCAATTTCTTTGTTGCTGACCCAAACAGCTCTAAGCCAGCTTTTGTGATTGTCTTGCCC
CCACCAAATGTGACTGGCGCTCTCCATATAGGACATGCACTTACAGCTGCCATCCAGGAT
ACAATTATTCGTTGGCGGAGAATGTCTGGATACAATGCCTTGTGGATCCCAGGGATGGAT
CATGCTGGAATCGCAACCCAGGTTGTTGTGGAAAAGAAGATCATGCGGGAGAGGAATTTG
ACTAGACATGATATTGGTCGGGAGAACTTCGTATCTGAAGTCTGGAATTGGAAGAATGAG
TATGGGGGTACTATACTGAAGCAATTACGTCGCCTGGGTGCGTCACTTGATTGGTCTCGT
GAGTGCTTTACCATGGATGAGAAAAGGTCTAAGGCTGTTACTGAAGCATTTGTTAGGCTG
TCCAATGAAGGTCTTATATACAGGGCTCCACGTATGGTGCATTGGGATTGTGTCTTGCGT
ACCGCAATCTCTGATATTGAGGTTGAATACACAGACATAAAAAAGAAGACACATTTGAAG
GTCCCTGGATATGAAGAGCCTGTGGAGTTTGGGGTACTGACATCATTTGCTTACCCCTTG
GAAGGTGGGCTTGGTGAAATCGTTGTGGCAACCACCAGAATTGAAACTATGCTTGGTGAT
ACTGCTATTGCTATACATCCTGAAGACAAAAGATACTGCCACCTTCATGGGAAATTTGCT
ATTCATCCATTCAATGGAAGAAAGCTTCCAATAGTTTGTGATGAAATACTTGTAGATATG
AACTTTGGTACTGGTGCTGTTAAGATAACTCCAGCCCATGATCCAAATGATTTTGAGTTT
GGACAGCGTCACAAACTTGAATTCATAAATATTTTTACTGATGATGGGAAAATAAATAGC
AACGGGGGTGCAGACTTTGAAGGAATGCCTCGTTTCAAAGCTCGTGTCGCTGTGGCTGAA
GCTTTAAAGGAAAAGGGTCTCTACAGGGATGTCAAGGATAACGAGATGCGCCTTGGGATT
TGTTCAAGAAGCAATGATGTAGTGGAACCTCTTGTAAAGCCTCAGTGGTTTGTCAACTGC
AAAAGTATGGCCAAACAGGCTTTGGATGCTGTGATGGATGATGATAACCGGAAGATGGAG
ATCATCCCCAAACAATATGCTGCTGAATGGAAAAGGCAGCTTTGGTGGGGTCATCGAATT
CCTGCTTGGTATGTGACACTGCATGATGATAAGCAGAAGGAATTTGGTGTTTGTGATGAT
CACTGGATCGTCGCTAGAAATGCAGAAGAGGCTCGAGATTTGGCTTGTAGGAAATTTCCA
GGGAAGGCGATTCTTGAGCTCTCTCAAGATCCAGATGTGCTGGATACCTGGTTTTCATCT
GGTCTTTTTCCATTATCTGCACTGGGGTGGCCAGATGATACTGCAGATTTAAAAGTTTTT
TATCCAACGTCCGTTATTGAAACTGGACATGATATTCTCTTCTTCTGGGTTGCACGTATG
GTGATGTTGGCGATAACACTGGGAGGTGATGTACCATTTATGAAGGTTTATTTGCATCCA
ATGATCCGTGACGCACAGGGACGTAAGATGTCCAAATCATTGGGAAATGTTGTTGATCCT
CTTGAAGTTATTAATGGAATTACCCTTGATAATCTTCACGAGAGATTAAAGGAGGGTAAC
CTGGATGCCAAAGAAATTGAGAGTGCAAAAGAGGGACAGGCAAAGGACTTTCCTAAGGGT
ATTCCTGAATGTGGGGCAGATGCTCTTCGATTTGCCCTAGTCTCATATACTGCTCAGTCT
GATAAAATCAATCTGGATATCCAGAGAGTTGTTGGGTATCGTCAGTGGTGTAATAAACTA
TGGAATGCCGTTAGGTTTGCCTTGAGTAAACTGGGTGAATATTACACGCCTCCAACAAAT
ATAGTTCCTCGTGAAATGCCTTTTATCTGCCAGTGGATACTCTCAGCACTTAACAAGGCC
ATAGCGAAAACTGTCTCATCCCTGGAATCTTATGACTTCTCCGATGCAGCAACAGCAGTA
TATTCGTTTTGGCAGTTCCAGTTGTGTGATGTGTTTATAGAAGTAATCAAGCCATACTTT
GTTGGTGATAATCCAGAATTTGTATCTGCAAGAAGATTTGCTCAAGACACCCTGTGGCTT
TGTTTAGATAACGGGTTGAGATTACTCCATCCGTTTATGCCATTTGTCTCCGAAGAATTA
TGGCAGCGTCTTCCAGCTAGCGGAAATTCCATAAAGAAAGAATCTATTGTGATAAGTGAT
TATCCTGCAACTATAGAGGGCTGGAATAATGATTGGGTAGAAGCTGGGATGGAAAAGGTG
TTGTCCATTGTTAAAGGTCTGAGGTCGAAGAGGGCATTGTTGCCTCCGAAGGAGAGATTC
GCAAGGCGAAAAGCATTTGTGCTTTGCTGGGCGGATGATAATGTGGAGTTCATACGAAGC
CGCAAAATGGAGATTTGCACTCTAGCTGCGTTGTCATCTTTGCAGGTCTCAAGTAACGGT
GATACAGCTCCGACTGAATGGCTGATAGAGGTTGTGGATGAGTCTGTCACGGTTTTTCTT
GAGGGAGAAGGGACTACTTGTGACCCAGTGGCTGAAATTCAAAGGCTCATAAAGAAGAGA
AAAGACACTAGGAAGCAATATGAAAACTTAAACAAAATGATGAGTGCCTCTCGCTACAAA
TAG

Peptide Sequence

PEP ID

XP_016514695.1
PEP Infomation

PREDICTED: valine--tRNA ligase, mitochondrial 1-like isoform X2 [Nicotiana tabacum]
Sequence

MLLYTRQPAYLQTELQSWFPPSATASIVTIYEQSNFASQVLSRPPRLSQPPPSAADSSSS
YAPLYFHFYSRYDDATSDGKELTLEDFEKKKKKEEKAREKELKKLKAALKVEAAKQAQAA
SNVSKKDKKKNSKMEGEEENYEDFVDPGTPLGEKKQLSRQMAKTYSPSAVEKSWYAWWEK
SNFFVADPNSSKPAFVIVLPPPNVTGALHIGHALTAAIQDTIIRWRRMSGYNALWIPGMD
HAGIATQVVVEKKIMRERNLTRHDIGRENFVSEVWNWKNEYGGTILKQLRRLGASLDWSR
ECFTMDEKRSKAVTEAFVRLSNEGLIYRAPRMVHWDCVLRTAISDIEVEYTDIKKKTHLK
VPGYEEPVEFGVLTSFAYPLEGGLGEIVVATTRIETMLGDTAIAIHPEDKRYCHLHGKFA
IHPFNGRKLPIVCDEILVDMNFGTGAVKITPAHDPNDFEFGQRHKLEFINIFTDDGKINS
NGGADFEGMPRFKARVAVAEALKEKGLYRDVKDNEMRLGICSRSNDVVEPLVKPQWFVNC
KSMAKQALDAVMDDDNRKMEIIPKQYAAEWKRQLWWGHRIPAWYVTLHDDKQKEFGVCDD
HWIVARNAEEARDLACRKFPGKAILELSQDPDVLDTWFSSGLFPLSALGWPDDTADLKVF
YPTSVIETGHDILFFWVARMVMLAITLGGDVPFMKVYLHPMIRDAQGRKMSKSLGNVVDP
LEVINGITLDNLHERLKEGNLDAKEIESAKEGQAKDFPKGIPECGADALRFALVSYTAQS
DKINLDIQRVVGYRQWCNKLWNAVRFALSKLGEYYTPPTNIVPREMPFICQWILSALNKA
IAKTVSSLESYDFSDAATAVYSFWQFQLCDVFIEVIKPYFVGDNPEFVSARRFAQDTLWL
CLDNGLRLLHPFMPFVSEELWQRLPASGNSIKKESIVISDYPATIEGWNNDWVEAGMEKV
LSIVKGLRSKRALLPPKERFARRKAFVLCWADDNVEFIRSRKMEICTLAALSSLQVSSNG
DTAPTEWLIEVVDESVTVFLEGEGTTCDPVAEIQRLIKKRKDTRKQYENLNKMMSASRYK

Transcript Sequence

Gene sequence data has not been registered.